blob: 931aef0bc41511399d8156a23340143e99f1a507 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
|
# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
inherit java-pkg-2 java-ant-2 eutils versionator
MY_PN="ij"
MY_PV=$(delete_all_version_separators)
# NOTE:
# as plugins are regularly lagging behind, we use the pack released for previous
# version instead. Change to present version locally if you are sure proper
# version has been released.
# see https://bugs.gentoo.org/show_bug.cgi?id=112275
# https://github.com/imagej/imagej1/issues/28
IJ_PV=$((${MY_PV::3}-1))
DESCRIPTION="Image Processing and Analysis in Java"
HOMEPAGE="http://rsb.info.nih.gov/ij/"
SRC_URI="http://imagej.nih.gov/ij/download/src/${MY_PN}${MY_PV}-src.zip
http://rsb.info.nih.gov/ij/images/ImageJ.png
plugins? ( http://wsr.imagej.net/distros/cross-platform/${MY_PN}${IJ_PV}.zip )"
# plugins are under a different licenses and can be installed into user's $IJ_HOME/plugins
# plugins? ( http://rsb.info.nih.gov/ij/download/zips/${MY_PN}${IJ_PV}.zip )"
RESTRICT=""
LICENSE="public-domain" # http://imagej.net/disclaimer.html
SLOT="0"
KEYWORDS=""
IUSE="doc plugins debug"
RDEPEND=">=virtual/jre-1.6:*
dev-java/java-config
dev-java/jython"
DEPEND=">=virtual/jdk-1.6:*
dev-java/ant-core
${RDEPEND}"
S=${WORKDIR}/source
IJ_S=${WORKDIR}/ImageJ
src_prepare() {
cp "${DISTDIR}"/ImageJ.png "${WORKDIR}/${PN}.png" || die
if ! use debug ; then
sed -i 's: debug="on">: debug="off">:' "${S}"/build.xml || die
fi
epatch "${FILESDIR}"/AutoThresholder.java.patch
eapply_user
}
# in src_compile we get: !!! ERROR: Package jython was not found!
# TODO: overwrite calls to jython ? See
# ij/plugin/frame/Editor.java
# plugin/PlugInInterpreter.java
# plugin/Macro_Runner.java
src_compile() {
local antflags="build"
use doc && antflags="${antflags} javadocs"
ant ${antflags} || die "ant build failed"
# Max memory usage depends on available memory and CPU type
MEM=$(grep MemTotal /proc/meminfo | cut -d':' -f2 | grep -o [0-9]*)
IJ_MAX_MEM=$(expr ${MEM} / 1024)
if use x86 && $IJ_MAX_MEM -gt 2048 ; then
IJ_MAX_MEM=2048
fi
# build finished, generate startup wrapper
cat <<EOF > "${T}/${PN}"
#!${EPREFIX}/bin/bash
IJ_LIB=${EPREFIX}/usr/share/${PN}/lib
if !([ "\${IJ_HOME}" ]) ; then
IJ_HOME=\${HOME}/.imagej
fi
if [ -d \${IJ_HOME}/plugins ] ; then
IJ_PLG=\${IJ_HOME}
else
IJ_PLG=${EPREFIX}/usr/share/${PN}/lib
fi
if !([ "\$IJ_MEM" ]) ; then
IJ_MEM=${IJ_MAX_MEM}
fi
if !([ "\$IJ_CP" ]) ; then
IJ_CP=\$(java-config -p imagej):\$(java-config -O)/lib/tools.jar
else
IJ_CP=\$(java-config -p imagej):\$(java-config -O)/lib/tools.jar:\${IJ_CP}
fi
\$(java-config --java) \\
-Xmx\${IJ_MEM}m -Dswing.aatext=true \\
-Dawt.useSystemAAFontSettings=on\\
-cp \${IJ_CP} \\
-Duser.home=\${IJ_HOME} \\
-Dplugins.dir=\${IJ_PLG} \\
ij.ImageJ "\$@"
EOF
}
src_install() {
java-pkg_dojar *.jar
dobin "${T}/${PN}"
if use plugins ; then
cp -R "${IJ_S}"/plugins "${ED}"/usr/share/"${PN}"/lib/
cp -R "${IJ_S}"/macros "${ED}"/usr/share/"${PN}"/lib/
fi
use doc && java-pkg_dohtml -r "${WORKDIR}"/api
insinto /usr/share/pixmaps
doins "${WORKDIR}/${PN}".png
make_desktop_entry "${PN}" ImageJ "${PN}".png Graphics
}
pkg_postinst() {
einfo ""
einfo "You can configure the path of a folder, which contains \"plugins\" directory and IJ_Prefs.txt,"
einfo "by setting the environmental variable, \$IJ_HOME."
einfo "Default setting is \$IJ_HOME=\${HOME}/.imagej, i.e. \${HOME}/.imagej/plugins and \${HOME}/.imagej/IJ_Prefs.txt."
einfo ""
einfo "You can also configure the memory size by setting the environmental variable, \$IJ_MEM,"
einfo "and the class path by setting the environmental variable, \$IJ_CP."
einfo ""
einfo "If you want to use much more plugins, please see http://rsb.info.nih.gov/ij/plugins/index.html"
einfo "and add *.class files to \$IJ_HOME/plugins folder"
einfo ""
}
|
