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authorTomas Kulhanek <tomas.kulhanek@stfc.ac.uk>2019-02-28 16:24:01 +0000
committerGitHub <noreply@github.com>2019-02-28 16:24:01 +0000
commit879c87c5709ee194a8c7a2207f5a21d4a757f723 (patch)
treeeddf7bc14a998ffabc7e9e01f0cca2ac44b1d88a /demos/demoMatlab_inpaint.m
parent4c728cf72345f7ab7967380cb536529fd9b1403d (diff)
parent68e6f3397e8a450854f39a5d514e1f747b9031a4 (diff)
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Merge pull request #104 from vais-ral/newdirstructure
New directory structure, Merged other changes. The build script checks old and new structure.
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diff --git a/demos/demoMatlab_inpaint.m b/demos/demoMatlab_inpaint.m
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+% Image (2D) inpainting demo using CCPi-RGL
+clear; close all
+Path1 = sprintf(['..' filesep 'src' filesep 'Matlab' filesep 'mex_compile' filesep 'installed'], 1i);
+Path2 = sprintf(['data' filesep], 1i);
+addpath(Path1);
+addpath(Path2);
+
+load('SinoInpaint.mat');
+Sinogram = Sinogram./max(Sinogram(:));
+Sino_mask = Sinogram.*(1-single(Mask));
+figure;
+subplot(1,2,1); imshow(Sino_mask, [0 1]); title('Missing data sinogram');
+subplot(1,2,2); imshow(Mask, [0 1]); title('Mask');
+%%
+fprintf('Inpaint using Linear-Diffusion model (CPU) \n');
+iter_diff = 5000; % number of diffusion iterations
+lambda_regDiff = 6000; % regularisation for the diffusivity
+sigmaPar = 0.0; % edge-preserving parameter
+tau_param = 0.000075; % time-marching constant
+tic; u_diff = NonlDiff_Inp(single(Sino_mask), Mask, lambda_regDiff, sigmaPar, iter_diff, tau_param); toc;
+figure; imshow(u_diff, [0 1]); title('Linear-Diffusion inpainted sinogram (CPU)');
+%%
+fprintf('Inpaint using Nonlinear-Diffusion model (CPU) \n');
+iter_diff = 1500; % number of diffusion iterations
+lambda_regDiff = 80; % regularisation for the diffusivity
+sigmaPar = 0.00009; % edge-preserving parameter
+tau_param = 0.000008; % time-marching constant
+tic; u_diff = NonlDiff_Inp(single(Sino_mask), Mask, lambda_regDiff, sigmaPar, iter_diff, tau_param, 'Huber'); toc;
+figure; imshow(u_diff, [0 1]); title('Non-Linear Diffusion inpainted sinogram (CPU)');
+%%
+fprintf('Inpaint using Nonlocal Vertical Marching model (CPU) \n');
+Increment = 1; % linear increment for the searching window
+tic; [u_nom,maskupd] = NonlocalMarching_Inpaint(single(Sino_mask), Mask, Increment); toc;
+figure; imshow(u_nom, [0 1]); title('NVM inpainted sinogram (CPU)');
+%% \ No newline at end of file