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* remove angle from ImageGeometry (#378)Edoardo Pasca2019-10-101-1/+0
| | | closes #371
* Finite diff for sirf (#367)Edoardo Pasca2019-10-0931-125/+417
| | | | | | | | | | | | | * python2 compatibility import future * add staticmethod dot to test LinearOperators * a little more efficient code * skips all tests if module wget is not present * removed sirf import and simplified code
* Subset for ndim 1 (#373)Edoardo Pasca2019-10-074-257/+68
| | | | | | | | | | | | * subset to return VectorData if dim=1 * move Vector to framework this removes circular dependency * repeat test * skip test
* use dimension_labels in clone of Acquisition/ImageGeometry (#366)Edoardo Pasca2019-09-201-2/+4
| | | closes #365
* added min info on Block FrameworkEdoardo Pasca2019-07-081-0/+13
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* added changelogEdoardo Pasca2019-07-081-0/+15
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* Merge pull request #352 from vais-ral/Remove_demosgfardell2019-07-0523-4526/+0
|\ | | | | Removed demos
| * Removed demosGemma Fardell2019-07-0523-4526/+0
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* Norm2Sq and FISTA to give hints of why they fail (#351)Edoardo Pasca2019-07-054-10/+239
| | | | | | | | | | | | * Norm2Sq and FISTA to give hints of why they fail * added denoising tests from demos * L1Norm store instance of ShrinkageOperator * relax limit for python2 * added source of tests
* Fix documentation (#343)Vaggelis Papoutsellis2019-07-0530-552/+837
| | | | | | | | | | | | * fix documentation algs * fix docum functions dir * fix docum operator dir * docstring title * updated math in docstring
* Merge gf branch (#350)Edoardo Pasca2019-07-047-207/+95
| | | | | | | | * Algorithms updated to initalise all member variables in set_up() * Added missing data files * Removed memopts=False path
* Revert "Gf algorithm bug fix (#348)" (#349)Edoardo Pasca2019-07-047-95/+207
| | | This reverts commit 6876bda04cde114642ebce3d6bd577da40fa34e9.
* Gf algorithm bug fix (#348)gfardell2019-07-047-207/+95
| | | | | | | | * Algorithms updated to initalise all member variables in set_up() * Added missing data files * Removed memopts=False path
* Headers comment (#342)Edoardo Pasca2019-07-0268-384/+787
| | | | | | | | | | | | | | | | * added to autoclass doc * added header * file permission * remove x permission * spdhg x mode * removed file * reset permission to 644
* remove from repoEdoardo Pasca2019-07-021-113/+0
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* replaced wrong hyphenEdoardo Pasca2019-07-021-1/+1
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* Merge pull request #340 from vais-ral/doc_allEdoardo Pasca2019-07-028-6/+182
|\ | | | | updated documentation with all classes
| * updated documentation with all classesEdoardo Pasca2019-07-028-6/+182
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* Update spdhg.pyEdoardo Pasca2019-07-021-1/+1
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* Merge pull request #339 from vais-ral/remove_wipEdoardo Pasca2019-07-0235-6593/+0
|\ | | | | removed wip directory
| * removed wip directoryEdoardo Pasca2019-07-0235-6593/+0
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* Merge pull request #332 from vais-ral/cgls_fixEdoardo Pasca2019-07-028-227/+559
|\ | | | | adds tolerance check to CGLS iterations as it may be unstable and diverge
| * added print of reached toleranceEdoardo Pasca2019-07-022-2/+5
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| * removed commentsEdoardo Pasca2019-07-011-61/+2
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| * calculation of flag in method, redefinition of default stop criterionEdoardo Pasca2019-07-011-15/+13
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| * use master implementationEdoardo Pasca2019-07-011-2/+0
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| * Merge branch 'master' into cgls_fixEdoardo Pasca2019-07-011-5/+18
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| * | fix cglsepapoutsellis2019-06-263-29/+26
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| * | fix cglsepapoutsellis2019-06-262-46/+56
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| * | fix cgls impleepapoutsellis2019-06-267-164/+486
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| * | cgls_testepapoutsellis2019-06-252-73/+136
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* | | added install instructionsEdoardo Pasca2019-07-011-8/+15
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* | Merge pull request #338 from vais-ral/verbose_outputEdoardo Pasca2019-07-011-5/+18
|\ \ | |/ |/| correct verbose output
| * removed or from ifEdoardo Pasca2019-07-011-2/+1
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| * correct verbose outputEdoardo Pasca2019-07-011-5/+19
|/ | | | closes #336
* Merge pull request #330 from vais-ral/demo_data_filesgfardell2019-06-243-12/+107
|\ | | | | Demo data files
| * Unit tests on test image loading and image sizeGemma Fardell2019-06-241-38/+69
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| * bug fix on generating test dataGemma Fardell2019-06-241-3/+3
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| * Added unittests for test dataGemma Fardell2019-06-211-7/+71
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| * Merge branch 'master' into demo_data_filesGemma Fardell2019-06-214-49/+420
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| * | added shapes.png to setup.pyGemma Fardell2019-06-211-1/+1
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| * | added shapes.png to setup.pyGemma Fardell2019-06-211-1/+1
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* | | Merge pull request #331 from vais-ral/numpy_versionsEdoardo Pasca2019-06-241-0/+2
|\ \ \ | |_|/ |/| | Update conda_build_config.yaml
| * | Update conda_build_config.yamlEdoardo Pasca2019-06-241-0/+2
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* | Merge pull request #329 from vais-ral/random_noise_functionEdoardo Pasca2019-06-214-51/+294
|\ \ | | | | | | Random noise function
| * | added testclass file to hold the CCPiTestClass definitionsEdoardo Pasca2019-06-211-0/+41
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| * | makes sure write tests happen before read testsEdoardo Pasca2019-06-211-2/+5
| | | | | | | | | | | | closes #328
| * | fix local import for python 2.7Edoardo Pasca2019-06-211-3/+4
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| * | temporarily renamed test_NexusReaderWriter.pyEdoardo Pasca2019-06-211-0/+0
| | | | | | | | | | | | renamed so that test do not fail. Urgently needs addressing #328
| * | added initial test for random_noiseEdoardo Pasca2019-06-211-0/+18
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