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authorEdoardo Pasca <edo.paskino@gmail.com>2019-04-12 13:58:46 +0100
committerEdoardo Pasca <edo.paskino@gmail.com>2019-04-12 13:58:46 +0100
commitb4f439677fa9a8d8235b2ddc0dcbda88cab7b76b (patch)
treee527b43855b2389e8b4c87f4e84f766a1690b45c /Wrappers/Python
parent7fc291f6d2d71b0d5aa7f3fcf11966910dcea7ab (diff)
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commutative algebra between BlockDataContainers and DataContainers
simplified algebra in DataContainer
Diffstat (limited to 'Wrappers/Python')
-rwxr-xr-xWrappers/Python/ccpi/framework/BlockDataContainer.py1
-rwxr-xr-xWrappers/Python/ccpi/framework/framework.py348
-rwxr-xr-xWrappers/Python/test/test_BlockDataContainer.py6
3 files changed, 204 insertions, 151 deletions
diff --git a/Wrappers/Python/ccpi/framework/BlockDataContainer.py b/Wrappers/Python/ccpi/framework/BlockDataContainer.py
index 529a1ce..060b130 100755
--- a/Wrappers/Python/ccpi/framework/BlockDataContainer.py
+++ b/Wrappers/Python/ccpi/framework/BlockDataContainer.py
@@ -45,6 +45,7 @@ class BlockDataContainer(object):
DIVIDE = 'divide'
POWER = 'power'
__array_priority__ = 1
+ __container_priority__ = 2
def __init__(self, *args, **kwargs):
''''''
self.containers = args
diff --git a/Wrappers/Python/ccpi/framework/framework.py b/Wrappers/Python/ccpi/framework/framework.py
index 07c2ead..3982965 100755
--- a/Wrappers/Python/ccpi/framework/framework.py
+++ b/Wrappers/Python/ccpi/framework/framework.py
@@ -320,6 +320,7 @@ class DataContainer(object):
Data is currently held in a numpy arrays'''
+ __container_priority__ = 1
def __init__ (self, array, deep_copy=True, dimension_labels=None,
**kwargs):
'''Holds the data'''
@@ -495,119 +496,134 @@ class DataContainer(object):
return self.shape == other.shape
## algebra
- def __add__(self, other, *args, **kwargs):
- out = kwargs.get('out', None)
-
- if issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- out = self.as_array() + other.as_array()
- return type(self)(out,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise ValueError('Wrong shape: {0} and {1}'.format(self.shape,
- other.shape))
- elif isinstance(other, (int, float, complex)):
- return type(self)(
- self.as_array() + other,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise TypeError('Cannot {0} DataContainer with {1}'.format("add" ,
- type(other)))
- # __add__
-
+# def __add__(self, other, *args, **kwargs):
+# out = kwargs.get('out', None)
+#
+# if issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# out = self.as_array() + other.as_array()
+# return type(self)(out,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise ValueError('Wrong shape: {0} and {1}'.format(self.shape,
+# other.shape))
+# elif isinstance(other, (int, float, complex)):
+# return type(self)(
+# self.as_array() + other,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise TypeError('Cannot {0} DataContainer with {1}'.format("add" ,
+# type(other)))
+# # __add__
+#
+# def __sub__(self, other):
+# if issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# out = self.as_array() - other.as_array()
+# return type(self)(out,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise ValueError('__sub__ Wrong shape: {0} and {1}'.format(self.shape,
+# other.shape))
+# elif isinstance(other, (int, float, complex)):
+# return type(self)(self.as_array() - other,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise TypeError('Cannot {0} DataContainer with {1}'.format("subtract" ,
+# type(other)))
+# # __sub__
+# def __truediv__(self,other):
+# return self.__div__(other)
+#
+# def __div__(self, other):
+# if issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# out = self.as_array() / other.as_array()
+# return type(self)(out,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise ValueError('__div__ Wrong shape: {0} and {1}'.format(self.shape,
+# other.shape))
+# elif isinstance(other, (int, float, complex)):
+# return type(self)(self.as_array() / other,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise TypeError('Cannot {0} DataContainer with {1}'.format("divide" ,
+# type(other)))
+# # __div__
+#
+# def __pow__(self, other):
+# if issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# out = self.as_array() ** other.as_array()
+# return type(self)(out,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise ValueError('__pow__ Wrong shape: {0} and {1}'.format(self.shape,
+# other.shape))
+# elif isinstance(other, (int, float, complex)):
+# return type(self)(self.as_array() ** other,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise TypeError('pow: Cannot {0} DataContainer with {1}'.format("power" ,
+# type(other)))
+# # __pow__
+#
+# def __mul__(self, other):
+# if issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# out = self.as_array() * other.as_array()
+# return type(self)(out,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+# else:
+# raise ValueError('*:Wrong shape: {0} and {1}'.format(self.shape,
+# other.shape))
+# elif isinstance(other, (int, float, complex,\
+# numpy.int, numpy.int8, numpy.int16, numpy.int32, numpy.int64,\
+# numpy.float, numpy.float16, numpy.float32, numpy.float64, \
+# numpy.complex)):
+# return type(self)(self.as_array() * other,
+# deep_copy=True,
+# dimension_labels=self.dimension_labels,
+# geometry=self.geometry)
+#
+# else:
+# raise TypeError('Cannot {0} DataContainer with {1}'.format("multiply" ,
+# type(other)))
+# # __mul__
+
+ def __add__(self, other):
+ return self.add(other)
+ def __mul__(self, other):
+ return self.multiply(other)
def __sub__(self, other):
- if issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- out = self.as_array() - other.as_array()
- return type(self)(out,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise ValueError('__sub__ Wrong shape: {0} and {1}'.format(self.shape,
- other.shape))
- elif isinstance(other, (int, float, complex)):
- return type(self)(self.as_array() - other,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise TypeError('Cannot {0} DataContainer with {1}'.format("subtract" ,
- type(other)))
- # __sub__
- def __truediv__(self,other):
- return self.__div__(other)
-
+ return self.subtract(other)
def __div__(self, other):
- if issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- out = self.as_array() / other.as_array()
- return type(self)(out,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise ValueError('__div__ Wrong shape: {0} and {1}'.format(self.shape,
- other.shape))
- elif isinstance(other, (int, float, complex)):
- return type(self)(self.as_array() / other,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise TypeError('Cannot {0} DataContainer with {1}'.format("divide" ,
- type(other)))
- # __div__
-
+ return self.divide(other)
+ def __truediv__(self, other):
+ return self.divide(other)
def __pow__(self, other):
- if issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- out = self.as_array() ** other.as_array()
- return type(self)(out,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise ValueError('__pow__ Wrong shape: {0} and {1}'.format(self.shape,
- other.shape))
- elif isinstance(other, (int, float, complex)):
- return type(self)(self.as_array() ** other,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise TypeError('pow: Cannot {0} DataContainer with {1}'.format("power" ,
- type(other)))
- # __pow__
+ return self.power(other)
+
- def __mul__(self, other):
- if issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- out = self.as_array() * other.as_array()
- return type(self)(out,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
- else:
- raise ValueError('*:Wrong shape: {0} and {1}'.format(self.shape,
- other.shape))
- elif isinstance(other, (int, float, complex,\
- numpy.int, numpy.int8, numpy.int16, numpy.int32, numpy.int64,\
- numpy.float, numpy.float16, numpy.float32, numpy.float64, \
- numpy.complex)):
- return type(self)(self.as_array() * other,
- deep_copy=True,
- dimension_labels=self.dimension_labels,
- geometry=self.geometry)
-
- else:
- raise TypeError('Cannot {0} DataContainer with {1}'.format("multiply" ,
- type(other)))
- # __mul__
# reverse operand
def __radd__(self, other):
@@ -648,54 +664,72 @@ class DataContainer(object):
# (+=, -=, *=, /= , //=,
# must return self
-
-
def __iadd__(self, other):
- if isinstance(other, (int, float)) :
- numpy.add(self.array, other, out=self.array)
- elif issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- numpy.add(self.array, other.array, out=self.array)
- else:
- raise ValueError('Dimensions do not match')
- return self
- # __iadd__
+ kw = {'out':self}
+ return self.add(other, **kw)
def __imul__(self, other):
- if isinstance(other, (int, float)) :
- arr = self.as_array()
- numpy.multiply(arr, other, out=arr)
- elif issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- numpy.multiply(self.array, other.array, out=self.array)
- else:
- raise ValueError('Dimensions do not match')
- return self
- # __imul__
+ kw = {'out':self}
+ return self.multiply(other, **kw)
def __isub__(self, other):
- if isinstance(other, (int, float)) :
- numpy.subtract(self.array, other, out=self.array)
- elif issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- numpy.subtract(self.array, other.array, out=self.array)
- else:
- raise ValueError('Dimensions do not match')
- return self
- # __isub__
+ kw = {'out':self}
+ return self.subtract(other, **kw)
def __idiv__(self, other):
- return self.__itruediv__(other)
+ kw = {'out':self}
+ return self.divide(other, **kw)
+
def __itruediv__(self, other):
- if isinstance(other, (int, float)) :
- numpy.divide(self.array, other, out=self.array)
- elif issubclass(type(other), DataContainer):
- if self.check_dimensions(other):
- numpy.divide(self.array, other.array, out=self.array)
- else:
- raise ValueError('Dimensions do not match')
- return self
- # __idiv__
+ kw = {'out':self}
+ return self.divide(other, **kw)
+
+# def __iadd__(self, other):
+# if isinstance(other, (int, float)) :
+# numpy.add(self.array, other, out=self.array)
+# elif issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# numpy.add(self.array, other.array, out=self.array)
+# else:
+# raise ValueError('Dimensions do not match')
+# return self
+# # __iadd__
+#
+# def __imul__(self, other):
+# if isinstance(other, (int, float)) :
+# arr = self.as_array()
+# numpy.multiply(arr, other, out=arr)
+# elif issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# numpy.multiply(self.array, other.array, out=self.array)
+# else:
+# raise ValueError('Dimensions do not match')
+# return self
+# # __imul__
+#
+# def __isub__(self, other):
+# if isinstance(other, (int, float)) :
+# numpy.subtract(self.array, other, out=self.array)
+# elif issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# numpy.subtract(self.array, other.array, out=self.array)
+# else:
+# raise ValueError('Dimensions do not match')
+# return self
+# # __isub__
+#
+# def __idiv__(self, other):
+# return self.__itruediv__(other)
+# def __itruediv__(self, other):
+# if isinstance(other, (int, float)) :
+# numpy.divide(self.array, other, out=self.array)
+# elif issubclass(type(other), DataContainer):
+# if self.check_dimensions(other):
+# numpy.divide(self.array, other.array, out=self.array)
+# else:
+# raise ValueError('Dimensions do not match')
+# return self
+# # __idiv__
def __str__ (self, representation=False):
repres = ""
@@ -802,15 +836,27 @@ class DataContainer(object):
raise ValueError (message(type(self), "incompatible class:" , pwop.__name__, type(out)))
def add(self, other, *args, **kwargs):
+ if hasattr(other, '__container_priority__') and \
+ self.__class__.__container_priority__ < other.__class__.__container_priority__:
+ return other.add(self, *args, **kwargs)
return self.pixel_wise_binary(numpy.add, other, *args, **kwargs)
def subtract(self, other, *args, **kwargs):
+ if hasattr(other, '__container_priority__') and \
+ self.__class__.__container_priority__ < other.__class__.__container_priority__:
+ return other.subtract(self, *args, **kwargs)
return self.pixel_wise_binary(numpy.subtract, other, *args, **kwargs)
def multiply(self, other, *args, **kwargs):
+ if hasattr(other, '__container_priority__') and \
+ self.__class__.__container_priority__ < other.__class__.__container_priority__:
+ return other.multiply(self, *args, **kwargs)
return self.pixel_wise_binary(numpy.multiply, other, *args, **kwargs)
def divide(self, other, *args, **kwargs):
+ if hasattr(other, '__container_priority__') and \
+ self.__class__.__container_priority__ < other.__class__.__container_priority__:
+ return other.divide(self, *args, **kwargs)
return self.pixel_wise_binary(numpy.divide, other, *args, **kwargs)
def power(self, other, *args, **kwargs):
@@ -883,7 +929,7 @@ class DataContainer(object):
class ImageData(DataContainer):
'''DataContainer for holding 2D or 3D DataContainer'''
-
+ __container_priority__ = 1
def __init__(self,
array = None,
deep_copy=False,
@@ -1006,7 +1052,7 @@ class ImageData(DataContainer):
class AcquisitionData(DataContainer):
'''DataContainer for holding 2D or 3D sinogram'''
-
+ __container_priority__ = 1
def __init__(self,
array = None,
deep_copy=True,
diff --git a/Wrappers/Python/test/test_BlockDataContainer.py b/Wrappers/Python/test/test_BlockDataContainer.py
index 0dd0657..a20f289 100755
--- a/Wrappers/Python/test/test_BlockDataContainer.py
+++ b/Wrappers/Python/test/test_BlockDataContainer.py
@@ -369,6 +369,12 @@ class TestBlockDataContainer(unittest.TestCase):
c5 = nbdc.get_item(0).power(2).sum()
c5a = nbdc.power(2).sum()
print ("sum", c5a, c5)
+
+ cp0 = BlockDataContainer(data0,data2)
+ a = cp0 * data2
+ b = data2 * cp0
+ self.assertBlockDataContainerEqual(a,b)
+
print ("test_Nested_BlockDataContainer OK")
def stest_NestedBlockDataContainer2(self):