summaryrefslogtreecommitdiffstats
diff options
context:
space:
mode:
authorEdoardo Pasca <edo.paskino@gmail.com>2019-04-15 16:56:49 +0100
committerEdoardo Pasca <edo.paskino@gmail.com>2019-04-15 16:56:49 +0100
commit35c6b27df5beb860d961d04744e6badc87c8a058 (patch)
tree375720792846e4e28bb2e3c8c145920aeff955cc
parentbc48b72e1e2cda814aa3c39569eb021fc5f0420d (diff)
downloadframework-35c6b27df5beb860d961d04744e6badc87c8a058.tar.gz
framework-35c6b27df5beb860d961d04744e6badc87c8a058.tar.bz2
framework-35c6b27df5beb860d961d04744e6badc87c8a058.tar.xz
framework-35c6b27df5beb860d961d04744e6badc87c8a058.zip
fix test and removed reference to PowerMethodNonsquare
-rw-r--r--Wrappers/Python/ccpi/optimisation/operators/FiniteDifferenceOperator.py3
-rw-r--r--Wrappers/Python/ccpi/optimisation/operators/GradientOperator.py3
-rw-r--r--Wrappers/Python/ccpi/optimisation/operators/SymmetrizedGradientOperator.py3
-rw-r--r--Wrappers/Python/test/test_Operator.py16
4 files changed, 11 insertions, 14 deletions
diff --git a/Wrappers/Python/ccpi/optimisation/operators/FiniteDifferenceOperator.py b/Wrappers/Python/ccpi/optimisation/operators/FiniteDifferenceOperator.py
index 835f96d..2c42532 100644
--- a/Wrappers/Python/ccpi/optimisation/operators/FiniteDifferenceOperator.py
+++ b/Wrappers/Python/ccpi/optimisation/operators/FiniteDifferenceOperator.py
@@ -7,7 +7,6 @@ Created on Fri Mar 1 22:51:17 2019
"""
from ccpi.optimisation.operators import LinearOperator
-from ccpi.optimisation.ops import PowerMethodNonsquare
from ccpi.framework import ImageData, BlockDataContainer
import numpy as np
@@ -318,7 +317,7 @@ class FiniteDiff(LinearOperator):
def norm(self):
x0 = self.gm_domain.allocate('random_int')
- self.s1, sall, svec = PowerMethodNonsquare(self, 25, x0)
+ self.s1, sall, svec = LinearOperator.PowerMethod(self, 25, x0)
return self.s1
diff --git a/Wrappers/Python/ccpi/optimisation/operators/GradientOperator.py b/Wrappers/Python/ccpi/optimisation/operators/GradientOperator.py
index 4935435..e0b8a32 100644
--- a/Wrappers/Python/ccpi/optimisation/operators/GradientOperator.py
+++ b/Wrappers/Python/ccpi/optimisation/operators/GradientOperator.py
@@ -7,7 +7,6 @@ Created on Fri Mar 1 22:50:04 2019
"""
from ccpi.optimisation.operators import Operator, LinearOperator, ScaledOperator
-from ccpi.optimisation.ops import PowerMethodNonsquare
from ccpi.framework import ImageData, ImageGeometry, BlockGeometry, BlockDataContainer
import numpy
from ccpi.optimisation.operators import FiniteDiff, SparseFiniteDiff
@@ -90,7 +89,7 @@ class Gradient(LinearOperator):
def norm(self):
x0 = self.gm_domain.allocate('random')
- self.s1, sall, svec = PowerMethodNonsquare(self, 10, x0)
+ self.s1, sall, svec = LinearOperator.PowerMethod(self, 10, x0)
return self.s1
def __rmul__(self, scalar):
diff --git a/Wrappers/Python/ccpi/optimisation/operators/SymmetrizedGradientOperator.py b/Wrappers/Python/ccpi/optimisation/operators/SymmetrizedGradientOperator.py
index c38458d..3fc43b8 100644
--- a/Wrappers/Python/ccpi/optimisation/operators/SymmetrizedGradientOperator.py
+++ b/Wrappers/Python/ccpi/optimisation/operators/SymmetrizedGradientOperator.py
@@ -7,7 +7,6 @@ Created on Fri Mar 1 22:53:55 2019
"""
from ccpi.optimisation.operators import Gradient, Operator, LinearOperator, ScaledOperator
-from ccpi.optimisation.ops import PowerMethodNonsquare
from ccpi.framework import ImageData, ImageGeometry, BlockGeometry, BlockDataContainer
import numpy
from ccpi.optimisation.operators import FiniteDiff, SparseFiniteDiff
@@ -108,7 +107,7 @@ class SymmetrizedGradient(Gradient):
#TODO this takes time for big ImageData
# for 2D ||grad|| = sqrt(8), 3D ||grad|| = sqrt(12)
x0 = ImageData(np.random.random_sample(self.domain_dim()))
- self.s1, sall, svec = PowerMethodNonsquare(self, 25, x0)
+ self.s1, sall, svec = LinearOperator.PowerMethod(self, 25, x0)
return self.s1
diff --git a/Wrappers/Python/test/test_Operator.py b/Wrappers/Python/test/test_Operator.py
index 70a1cd6..542e103 100644
--- a/Wrappers/Python/test/test_Operator.py
+++ b/Wrappers/Python/test/test_Operator.py
@@ -1,6 +1,6 @@
import unittest
#from ccpi.optimisation.operators import Operator
-from ccpi.optimisation.ops import TomoIdentity
+#from ccpi.optimisation.ops import TomoIdentity
from ccpi.framework import ImageGeometry, ImageData, BlockDataContainer, DataContainer
from ccpi.optimisation.operators import BlockOperator, BlockScaledOperator,\
FiniteDiff
@@ -54,7 +54,7 @@ class TestOperator(CCPiTestClass):
ig = ImageGeometry(10,20,30)
img = ig.allocate()
scalar = 0.5
- sid = scalar * TomoIdentity(ig)
+ sid = scalar * Identity(ig)
numpy.testing.assert_array_equal(scalar * img.as_array(), sid.direct(img).as_array())
@@ -63,7 +63,7 @@ class TestOperator(CCPiTestClass):
img = ig.allocate()
self.assertTrue(img.shape == (30,20,10))
self.assertEqual(img.sum(), 0)
- Id = TomoIdentity(ig)
+ Id = Identity(ig)
y = Id.direct(img)
numpy.testing.assert_array_equal(y.as_array(), img.as_array())
@@ -107,10 +107,10 @@ class TestOperator(CCPiTestClass):
G = Gradient(ig)
- uid = Id.domain_geometry().allocate(ImageGeometry.RANDOM_INT)
+ uid = Id.domain_geometry().allocate(ImageGeometry.RANDOM_INT, seed=1)
- a = LinearOperator.PowerMethod(Id, 10, uid)
- b = LinearOperator.PowerMethodNonsquare(Id, 10, uid)
+ a = LinearOperator.PowerMethod(Id, 1000, uid)
+ b = LinearOperator.PowerMethodNonsquare(Id, 1000, uid)
print ("Edo impl", a[0])
print ("old impl", b[0])
@@ -118,8 +118,8 @@ class TestOperator(CCPiTestClass):
#self.assertAlmostEqual(a[0], b[0])
self.assertNumpyArrayAlmostEqual(a[0],b[0],decimal=6)
- a = LinearOperator.PowerMethod(G, 10, uid)
- b = LinearOperator.PowerMethodNonsquare(G, 10, uid)
+ a = LinearOperator.PowerMethod(G, 1000, uid)
+ b = LinearOperator.PowerMethodNonsquare(G, 1000, uid)
print ("Edo impl", a[0])
print ("old impl", b[0])