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|
install_type=@INSTALL_TYPE@
cuda=@HAVECUDA@
matlab=@HAVEMATLAB@
python=@HAVEPYTHON@
boostutf=@HAVEBOOSTUTF@
MATLAB_ROOT=@MATLAB_ROOT@
octave=@HAVEOCTAVE@
MKDIR=mkdir -p
CXX=@CXX@
LD=@CXX@
SHELL=@SHELL@
INSTALL_SH=$(SHELL) $(srcdir)/install-sh
TARGETS=libastra.la
ifeq ($(matlab),yes)
TARGETS+=mex
endif
ifeq ($(python),yes)
TARGETS+=py
endif
ifeq ($(octave),yes)
TARGETS+=oct
endif
all: $(TARGETS)
prefix=@prefix@
exec_prefix=@exec_prefix@
datarootdir=@datarootdir@
srcdir=@srcdir@
abs_top_builddir=@abs_top_builddir@
VPATH=@VPATH_SRCDIR@/../..
CPPFLAGS=@SAVED_CPPFLAGS@
CXXFLAGS=@SAVED_CXXFLAGS@
NVCCFLAGS=@SAVED_NVCCFLAGS@
LDFLAGS=@SAVED_LDFLAGS@
LIBS=@SAVED_LIBS@
CXXFLAGS+=-g -O3 -Wall -Wshadow
LIBS+=-lpthread
LDFLAGS+=-g
CPPFLAGS+=@CPPFLAGS_OS@
BOOSTUTF_LIBS=@LIBS_BOOSTUTF@
ifeq ($(cuda),yes)
CPPFLAGS += @CPPFLAGS_CUDA@ -DASTRA_CUDA
NVCCFLAGS += @NVCCFLAGS_EXTRA@ @CPPFLAGS_CUDA@ -I$(srcdir)/../.. -I$(srcdir)/../../include -DASTRA_CUDA
LDFLAGS += @LDFLAGS_CUDA@
LIBS += -lcudart -lcufft
NVCC = @NVCC@
endif
ifeq ($(matlab),yes)
# TODO: Do we also want -fopenmp for octave?
CPPFLAGS+=-I$(MATLAB_ROOT)/extern/include -DMATLAB_MEX_FILE
CXXFLAGS+=-fopenmp
LDFLAGS+=-fopenmp
endif
# MODLDFLAGS are the base LDFLAGS for matlab, octave, python modules
MODLDFLAGS=$(LDFLAGS) -L$(abs_top_builddir)/.libs
ifeq ($(install_type),module)
MODLDFLAGS+=-Wl,-rpath,'\$$ORIGIN'
endif
ifeq ($(python),yes)
PYTHON = @PYTHON@
PYINCDIR := $(shell $(PYTHON) -c 'from __future__ import print_function; from distutils.sysconfig import get_python_inc; print(get_python_inc())')
PYLIBVER = `basename $(PYINCDIR)`
CPPFLAGS += -DASTRA_PYTHON -I$(PYINCDIR)
PYCPPFLAGS := $(CPPFLAGS)
PYCPPFLAGS += -I../include
PYLDFLAGS = $(MODLDFLAGS)
MODPYLIBS=-l$(PYLIBVER)
endif
# This is below where PYCPPFLAGS copies CPPFLAGS. The python code is built
# from a different directory, so these relative includes would be wrong.
CPPFLAGS+=-I$(srcdir)/../.. -I$(srcdir)/../../include -I$(srcdir)/../../lib/include
ifeq ($(matlab),yes)
MEXFLAGS = -cxx
MEXLDFLAGS=\$$LDFLAGS $(MODLDFLAGS)
MEXLIBS = -lut
MEXSUFFIX = @MEXSUFFIX@
MEX = @MEX@
ifeq ($(cuda),yes)
MEXFLAGS += -DASTRA_CUDA
endif
endif
ifeq ($(octave),yes)
OCTLDFLAGS:=$(MODLDFLAGS)
CPPFLAGS += @OCTAVE_CPPFLAGS@
ifeq ($(cuda),yes)
OCTFLAGS=-DASTRA_CUDA
else
OCTFLAGS=
endif
endif
DEPDIR=.deps
BASE_OBJECTS=\
src/Algorithm.lo \
src/AsyncAlgorithm.lo \
src/ReconstructionAlgorithm2D.lo \
src/ReconstructionAlgorithm3D.lo \
src/ArtAlgorithm.lo \
src/AstraObjectFactory.lo \
src/AstraObjectManager.lo \
src/BackProjectionAlgorithm.lo \
src/CglsAlgorithm.lo \
src/CompositeGeometryManager.lo \
src/ConeProjectionGeometry3D.lo \
src/ConeVecProjectionGeometry3D.lo \
src/Config.lo \
src/DataProjector.lo \
src/DataProjectorPolicies.lo \
src/FanFlatBeamLineKernelProjector2D.lo \
src/FanFlatBeamStripKernelProjector2D.lo \
src/FanFlatProjectionGeometry2D.lo \
src/FanFlatVecProjectionGeometry2D.lo \
src/FilteredBackProjectionAlgorithm.lo \
src/Float32Data2D.lo \
src/Float32Data3D.lo \
src/Float32Data3DMemory.lo \
src/Float32Data.lo \
src/Float32ProjectionData2D.lo \
src/Float32ProjectionData3D.lo \
src/Float32ProjectionData3DMemory.lo \
src/Float32VolumeData2D.lo \
src/Float32VolumeData3D.lo \
src/Float32VolumeData3DMemory.lo \
src/ForwardProjectionAlgorithm.lo \
src/Fourier.lo \
src/GeometryUtil3D.lo \
src/Globals.lo \
src/Logging.lo \
src/ParallelBeamBlobKernelProjector2D.lo \
src/ParallelBeamLinearKernelProjector2D.lo \
src/ParallelBeamLineKernelProjector2D.lo \
src/ParallelBeamStripKernelProjector2D.lo \
src/ParallelProjectionGeometry2D.lo \
src/ParallelProjectionGeometry3D.lo \
src/ParallelVecProjectionGeometry3D.lo \
src/PlatformDepSystemCode.lo \
src/PluginAlgorithm.lo \
src/ProjectionGeometry2D.lo \
src/ProjectionGeometry3D.lo \
src/Projector2D.lo \
src/Projector3D.lo \
src/SartAlgorithm.lo \
src/SirtAlgorithm.lo \
src/SparseMatrixProjectionGeometry2D.lo \
src/SparseMatrixProjector2D.lo \
src/SparseMatrix.lo \
src/Utilities.lo \
src/VolumeGeometry2D.lo \
src/VolumeGeometry3D.lo \
src/XMLDocument.lo \
src/XMLNode.lo \
src/swrap.lo
CUDA_CXX_OBJECTS=\
src/CudaProjector2D.lo \
src/CudaProjector3D.lo \
src/CudaReconstructionAlgorithm2D.lo \
src/CudaBackProjectionAlgorithm.lo \
src/CudaDartMaskAlgorithm.lo \
src/CudaDartMaskAlgorithm3D.lo \
src/CudaDataOperationAlgorithm.lo \
src/CudaRoiSelectAlgorithm.lo \
src/CudaDartSmoothingAlgorithm.lo \
src/CudaDartSmoothingAlgorithm3D.lo \
src/CudaFilteredBackProjectionAlgorithm.lo \
src/CudaForwardProjectionAlgorithm.lo \
src/CudaSartAlgorithm.lo \
src/CudaSirtAlgorithm.lo \
src/CudaCglsAlgorithm.lo \
src/CudaCglsAlgorithm3D.lo \
src/CudaEMAlgorithm.lo \
src/CudaFDKAlgorithm3D.lo \
src/CudaSirtAlgorithm3D.lo \
src/CudaBackProjectionAlgorithm3D.lo \
src/CudaForwardProjectionAlgorithm3D.lo
CUDA_OBJECTS=\
cuda/2d/algo.lo \
cuda/2d/par_fp.lo \
cuda/2d/par_bp.lo \
cuda/2d/fan_fp.lo \
cuda/2d/fan_bp.lo \
cuda/2d/sirt.lo \
cuda/2d/sart.lo \
cuda/2d/cgls.lo \
cuda/2d/em.lo \
cuda/2d/astra.lo \
cuda/2d/util.lo \
cuda/2d/arith.lo \
cuda/2d/fft.lo \
cuda/2d/darthelper.lo \
cuda/3d/darthelper3d.lo \
cuda/3d/algo3d.lo \
cuda/3d/cgls3d.lo \
cuda/3d/cone_fp.lo \
cuda/3d/cone_bp.lo \
cuda/3d/fdk.lo \
cuda/3d/par3d_fp.lo \
cuda/3d/par3d_bp.lo \
cuda/3d/sirt3d.lo \
cuda/3d/astra3d.lo \
cuda/3d/util3d.lo \
cuda/3d/arith3d.lo \
cuda/3d/mem3d.lo
ALL_OBJECTS=$(BASE_OBJECTS)
ifeq ($(cuda),yes)
ALL_OBJECTS+=$(CUDA_CXX_OBJECTS) $(CUDA_OBJECTS)
endif
TEST_OBJECTS=\
tests/main.o \
tests/test_AstraObjectManager.o \
tests/test_ParallelBeamLineKernelProjector2D.o \
tests/test_ParallelBeamLinearKernelProjector2D.o \
tests/test_Float32Data2D.o \
tests/test_VolumeGeometry2D.o \
tests/test_ParallelProjectionGeometry2D.o \
tests/test_FanFlatProjectionGeometry2D.o \
tests/test_Float32VolumeData2D.o \
tests/test_Float32ProjectionData2D.o \
tests/test_Fourier.o \
tests/test_XMLDocument.o
MATLAB_CXX_OBJECTS=\
matlab/mex/mexHelpFunctions.o \
matlab/mex/mexCopyDataHelpFunctions.o \
matlab/mex/mexInitFunctions.o \
matlab/mex/mexDataManagerHelpFunctions.o
MATLAB_MEX=\
matlab/mex/astra_mex_algorithm_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_data2d_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_matrix_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_projector_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_projector3d_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_log_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_data3d_c.$(MEXSUFFIX) \
matlab/mex/astra_mex_direct_c.$(MEXSUFFIX)
OCTAVE_CXX_OBJECTS=\
matlab/mex/octave_support.o
OCTAVE_MEX=\
matlab/mex/astra_mex_algorithm_c.mex \
matlab/mex/astra_mex_data2d_c.mex \
matlab/mex/astra_mex_c.mex \
matlab/mex/astra_mex_matrix_c.mex \
matlab/mex/astra_mex_projector_c.mex \
matlab/mex/astra_mex_projector3d_c.mex \
matlab/mex/astra_mex_log_c.mex \
matlab/mex/astra_mex_data3d_c.mex \
matlab/mex/astra_mex_direct_c.mex
ifeq ($(python),yes)
MATLAB_MEX+=matlab/mex/astra_mex_plugin_c.$(MEXSUFFIX)
OCTAVE_MEX+=matlab/mex/astra_mex_plugin_c.mex
endif
OBJECT_DIRS = src/ tests/ cuda/2d/ cuda/3d/ matlab/mex/ ./
DEPDIRS = $(addsuffix $(DEPDIR),$(OBJECT_DIRS))
-include $(wildcard $(addsuffix /*.d,$(DEPDIRS)))
LIBDIRS = $(addsuffix .libs,./ src/ cuda/2d/ cuda/3d/)
SONAME=$(shell . ${abs_top_builddir}/libastra.la; echo $$dlname)
ifeq ($(matlab),yes)
mex: $(MATLAB_MEX)
%.$(MEXSUFFIX): %.o $(MATLAB_CXX_OBJECTS) libastra.la
$(MEX) LDFLAGS="$(MEXLDFLAGS)" $(MEXFLAGS) $(LIBS) $(MEXLIBS) -lastra -output $* $*.o $(MATLAB_CXX_OBJECTS)
ifeq ($(python),yes)
matlab/mex/astra_mex_plugin_c.$(MEXSUFFIX): matlab/mex/astra_mex_plugin_c.o $(MATLAB_CXX_OBJECTS) libastra.la
$(MEX) LDFLAGS="$(MEXLDFLAGS)" $(MEXFLAGS) $(LIBS) $(MEXLIBS) $(MODPYLIBS) -lastra -output matlab/mex/astra_mex_plugin_c $< $(MATLAB_CXX_OBJECTS)
endif
endif
ifeq ($(python),yes)
py: libastra.la
$(MKDIR) python/build
# TODO: Avoid writing into source dir
ln -s $(abs_top_builddir)/.libs/$(SONAME) $(srcdir)/../../python/astra
# Note: setting CC to CXX is intentional. Python uses CC for compilation even if input is C++.
cd $(srcdir)/../../python; ASTRA_INSTALL_LIBRARY_AS_DATA=$(PYPKGDATA) CXX="${CXX}" CC="${CXX}" CPPFLAGS="${PYCPPFLAGS}" LDFLAGS='${PYLDFLAGS}' $(PYTHON) builder.py build --build-base=$(abs_top_builddir)/python/build
rm $(srcdir)/../../python/astra/$(SONAME)
endif
ifeq ($(octave),yes)
oct: $(OCTAVE_MEX)
%.mex: %.o $(MATLAB_CXX_OBJECTS) $(OCTAVE_CXX_OBJECTS) libastra.la
mkoctfile --mex $(OCTFLAGS) $(OCTLDFLAGS) $(LIBS) -lastra --output $* $*.o $(MATLAB_CXX_OBJECTS) $(OCTAVE_CXX_OBJECTS)
ifeq ($(python),yes)
matlab/mex/astra_mex_plugin_c.mex: matlab/mex/astra_mex_plugin_c.o $(MATLAB_CXX_OBJECTS) $(OCTAVE_CXX_OBJECTS) libastra.la
mkoctfile --mex $(OCTFLAGS) $(OCTLDFLAGS) $(LIBS) $(MODPYLIBS) -lastra --output matlab/mex/astra_mex_plugin_c $< $(MATLAB_CXX_OBJECTS) $(OCTAVE_CXX_OBJECTS)
endif
endif
libastra.la: $(ALL_OBJECTS)
./libtool --mode=link --tag=CXX $(LD) -rpath @libdir@ -o $@ $(LDFLAGS) $(LIBS) $+
%.o: %.cpp
$(MKDIR) $(*D)/$(DEPDIR)
$(CXX) -Wp,-MMD,"$(*D)/$(DEPDIR)/$(*F).d",-MQ,"$@",-MP $(CXXFLAGS) -fPIC -DPIC $(CPPFLAGS) -c $(<) -o $*.o
%.lo: %.cpp
$(MKDIR) $(*D)/$(DEPDIR)
./libtool --mode=compile --tag=CXX $(CXX) -Wp,-MMD,"$(*D)/$(DEPDIR)/$(*F).d",-MQ,"$@",-MP $(CXXFLAGS) $(CPPFLAGS) -c $(<) -o $*.o
gen_static_libs := `./libtool --features | grep -q 'disable static' && echo no || echo yes`
ifeq ($(cuda),yes)
%.lo: %.cu
@# Behave like libtool: compile both a PIC and a non-PIC object file
@$(MKDIR) $(*D)
@$(MKDIR) $(*D)/.libs
@$(MKDIR) $(*D)/$(DEPDIR)
$(NVCC) $(NVCCFLAGS) -c $(<) -Xcompiler -fPIC -DPIC -o $(*D)/.libs/$(*F).o
ifeq ($(gen_static_libs),yes)
@$(NVCC) $(NVCCFLAGS) -c $(<) -o $*.o >/dev/null 2>&1
endif
@# Generate a .d file, and change the target name in it from .o to .lo
@$(NVCC) $(NVCCFLAGS) -M $(<) -odir $(*D) -o $(*D)/$(DEPDIR)/$(*F).d2
@sed '1s/\.o :/.lo :/' < $(*D)/$(DEPDIR)/$(*F).d2 > $(*D)/$(DEPDIR)/$(*F).d
@rm -f $(*D)/$(DEPDIR)/$(*F).d2
@# Generate empty targets for all dependencies listed in the .d file.
@# This mimics gcc's -MP option.
@for x in `cat $(*D)/$(DEPDIR)/$(*F).d`; do if test a$$x != a: -a a$$x != a\\; then echo -e "\n$$x:\n" >> $(*D)/$(DEPDIR)/$(*F).d; fi; done
@# Generate a fake libtool .lo file
@echo "# $*.lo - a libtool object file" > $*.lo
@echo "# Generated by" `./libtool --version | head -n 1` >> $*.lo
@echo "#" >> $*.lo
@echo "# Please DO NOT delete this file!" >> $*.lo
@echo "# It is necessary for linking the library." >> $*.lo
@echo >> $*.lo
@echo "# Name of the PIC object." >> $*.lo
@echo "pic_object='.libs/$(*F).o'" >> $*.lo
@echo >> $*.lo
@echo "# Name of the non-PIC object." >> $*.lo
ifeq ($(gen_static_libs),yes)
@echo "non_pic_object='$(*F).o'" >> $*.lo
else
@echo "non_pic_object=none" >> $*.lo
endif
@# Remove generated .linkinfo file
@rm -f $(*F).linkinfo
endif
ifeq ($(boostutf),yes)
test.bin: $(ALL_OBJECTS) $(TEST_OBJECTS)
./libtool --mode=link $(LD) -o $@ $(LDFLAGS) $+ $(LIBS) $(BOOSTUTF_LIBS)
test: test.bin
./test.bin
else
test:
@echo "Tests have been disabled by configure"
endif
clean:
rm -f $(MATLAB_MEX) libastra.la
rm -f $(addsuffix /*.lo,$(OBJECT_DIRS))
rm -f $(addsuffix /*.o,$(OBJECT_DIRS))
rm -f $(addsuffix /*.d,$(DEPDIRS))
rm -f $(addsuffix /*,$(LIBDIRS))
rm -f $(TEST_OBJECTS) test.bin
rm -fr python/finalbuild/
rm -fr python/build/
rm -f $(srcdir)/../../python/astra/*.cpp
rm -f $(srcdir)/../../python/astra/*.c
distclean: clean
rm -f $(srcdir)/config.guess $(srcdir)/config.sub $(srcdir)/ltmain.sh libtool $(srcdir)/install-sh
rm -f config.log config.status
rm -f $(srcdir)/aclocal.m4
rm -rf $(srcdir)/autom4te.cache
rm -f $(srcdir)/configure Makefile
install-libraries: libastra.la
$(INSTALL_SH) -m 755 -d @libdir@
./libtool --mode=install $(INSTALL_SH) -m 644 libastra.la @libdir@
./libtool --mode=finish @libdir@
# ------------------------
# INSTALLATION
# ------------------------
ifeq ($(install_type),prefix)
# libraries into @libdir@, python into site-packages, mex into @datadir@
install: install-libraries install-matlab install-python-site-packages install-octave
PYPKGDATA=
MATLABBASE=@datadir@/astra/matlab
OCTAVEBASE=@datadir@/astra/octave
endif
ifeq ($(install_type),dir)
# everything into @prefix@
install: install-libraries install-matlab install-python install-octave
PYPKGDATA=
MATLABBASE=@prefix@/matlab
OCTAVEBASE=@prefix@/octave
PYTHONBASE=@prefix@/python
endif
ifeq ($(install_type),module)
# python into site-packages, mex into @datadir@
# library copied into python/mex directories
# modules built with rpath=$ORIGIN
install: install-matlab install-python-site-packages install-octave
PYPKGDATA=$(SONAME)
MATLABBASE=@prefix@/matlab
OCTAVEBASE=@prefix@/octave
install-matlab-so: libastra.la
$(INSTALL_SH) -m 755 -d $(MATLABBASE)/mex
$(INSTALL_SH) -m 755 $(abs_top_builddir)/.libs/$(SONAME) $(MATLABBASE)/mex
install-octave-so: libastra.la
$(INSTALL_SH) -m 755 -d $(OCTAVEBASE)/mex
$(INSTALL_SH) -m 755 $(abs_top_builddir)/.libs/$(SONAME) $(OCTAVEBASE)/mex
else
install-matlab-so:
install-octave-so:
endif
ifeq ($(python),yes)
install-python: py
$(MKDIR) python/finalbuild
# Note: setting CC to CXX is intentional. Python uses CC for compilation even if input is C++.
cd $(srcdir)/../../python; ASTRA_INSTALL_LIBRARY_AS_DATA=$(PYPKGDATA) CXX="${CXX}" CC="${CXX}" CPPFLAGS="${PYCPPFLAGS}" LDFLAGS="${PYLDFLAGS}" $(PYTHON) builder.py build --build-base=$(abs_top_builddir)/python/build install \
--install-base=$(abs_top_builddir)/python/finalbuild --install-headers=$(abs_top_builddir)/python/finalbuild --install-purelib=$(abs_top_builddir)/python/finalbuild \
--install-platlib=$(abs_top_builddir)/python/finalbuild --install-scripts=$(abs_top_builddir)/python/finalbuild --install-data=$(abs_top_builddir)/python/finalbuild
$(INSTALL_SH) -m 755 -d @prefix@/python
$(INSTALL_SH) -m 755 -d @prefix@/python/astra
$(INSTALL_SH) -m 755 -d @prefix@/python/astra/plugins
$(INSTALL_SH) -m 755 python/finalbuild/astra/*.so @prefix@/python/astra
$(INSTALL_SH) -m 644 python/finalbuild/astra/*.py @prefix@/python/astra
$(INSTALL_SH) -m 644 python/finalbuild/astra/plugins/*.py @prefix@/python/astra/plugins
$(INSTALL_SH) -m 644 python/finalbuild/*.egg-info @prefix@/python/
# TODO: docs
install-python-site-packages: py
# Note: setting CC to CXX is intentional. Python uses CC for compilation even if input is C++.
cd $(srcdir)/../../python; ASTRA_INSTALL_LIBRARY_AS_DATA=$(PYPKGDATA) CXX="${CXX}" CC="${CXX}" CPPFLAGS="${PYCPPFLAGS}" LDFLAGS="${PYLDFLAGS}" $(PYTHON) builder.py build --build-base=$(abs_top_builddir)/python/build install
else
install-python-site-packages:
install-python:
endif
ifeq ($(matlab),yes)
install-matlab: $(MATLAB_MEX) install-matlab-so
$(INSTALL_SH) -m 755 -d $(MATLABBASE)
$(INSTALL_SH) -m 755 -d $(MATLABBASE)/mex
$(INSTALL_SH) -m 755 -d $(MATLABBASE)/tools
$(INSTALL_SH) -m 755 $(MATLAB_MEX) $(MATLABBASE)/mex
$(INSTALL_SH) -m 644 $(srcdir)/../../matlab/tools/*.m $(MATLABBASE)/tools
# TODO: docs
else
install-matlab:
endif
ifeq ($(octave),yes)
install-octave: $(OCTAVE_MEX) install-octave-so
$(INSTALL_SH) -m 755 -d $(OCTAVEBASE)
$(INSTALL_SH) -m 755 -d $(OCTAVEBASE)/mex
$(INSTALL_SH) -m 755 -d $(OCTAVEBASE)/tools
$(INSTALL_SH) -m 755 $(OCTAVE_MEX) $(OCTAVEBASE)/mex
$(INSTALL_SH) -m 644 $(srcdir)/../../matlab/tools/*.m $(OCTAVEBASE)/tools
# TODO: docs
else
install-octave:
endif
Makefile: $(srcdir)/Makefile.in config.status
CONFIG_HEADERS= CONFIG_LINKS= CONFIG_FILES=$@ $(SHELL) ./config.status
config.status: $(srcdir)/configure
@echo "configure script has changed. Re-running it with last parameters"
$(SHELL) ./config.status --recheck
$(srcdir)/configure: $(srcdir)/configure.ac
@echo "configure.ac has been changed. Regenerating configure script"
cd $(srcdir) && $(SHELL) ./autogen.sh
.PHONY: all mex test clean distclean install install-libraries py install-python-site-packages install-python install-octave install-matlab-so install-octave-so
# don't remove intermediate files:
.SECONDARY:
# disable all implicit built-in rules
.SUFFIXES:
|