From b2fc6c70434674d74551c3a6c01ffb3233499312 Mon Sep 17 00:00:00 2001
From: Willem Jan Palenstijn <WillemJan.Palenstijn@uantwerpen.be>
Date: Mon, 1 Jul 2013 22:34:11 +0000
Subject: Update version to 1.3

---
 include/astra/SparseMatrix.h | 144 +++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 144 insertions(+)
 create mode 100644 include/astra/SparseMatrix.h

(limited to 'include/astra/SparseMatrix.h')

diff --git a/include/astra/SparseMatrix.h b/include/astra/SparseMatrix.h
new file mode 100644
index 0000000..e07be87
--- /dev/null
+++ b/include/astra/SparseMatrix.h
@@ -0,0 +1,144 @@
+/*
+-----------------------------------------------------------------------
+Copyright 2012 iMinds-Vision Lab, University of Antwerp
+
+Contact: astra@ua.ac.be
+Website: http://astra.ua.ac.be
+
+
+This file is part of the
+All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox").
+
+The ASTRA Toolbox is free software: you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation, either version 3 of the License, or
+(at your option) any later version.
+
+The ASTRA Toolbox is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License
+along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>.
+
+-----------------------------------------------------------------------
+$Id$
+*/
+
+#ifndef _INC_ASTRA_SPARSEMATRIX
+#define _INC_ASTRA_SPARSEMATRIX
+
+namespace astra
+{
+
+
+/** This class implements a sparse matrix. It is stored as three arrays.
+ *  The values are stored row-by-row.
+ *  m_pfValues     contains the values
+ *  m_piColIndices contains the col indices of the values
+ *  m_plRowStarts  contains the start offsets of the rows
+ */
+
+
+class _AstraExport CSparseMatrix {
+public:
+	CSparseMatrix();
+
+	// TODO: are ints large enough for width/height?
+	CSparseMatrix(unsigned int _iHeight, unsigned int _iWidth,
+	              unsigned long _lSize);
+
+	/** Initialize the matrix structure.
+	 *  It does not initialize any values.
+	 *
+	 * @param _iHeight number of rows
+	 * @param _iWidth number of columns
+	 * @param _lSize maximum number of non-zero entries
+	 * @return initialization successful?
+	 */
+
+	bool initialize(unsigned int _iHeight, unsigned int _iWidth,
+	                unsigned long _lSize);
+
+	/** Destructor.
+	 */
+	~CSparseMatrix();
+
+	/** Has the matrix structure been initialized?
+	 *
+	 * @return initialized successfully
+	 */
+	bool isInitialized() const { return m_bInitialized; }
+
+	/** get a description of the class
+	 *
+	 * @return description string
+	 */
+	std::string description() const;
+
+	/** get the data for a single row. Entries are stored from left to right.
+	 *
+	 * @param _iRow the row
+	 * @param _iSize the returned number of elements in the row
+	 * @param _pfValues the values of the non-zero entries in the row
+	 * @param _piColIndices the column indices of the non-zero entries
+	 */
+	void getRowData(unsigned int _iRow, unsigned int& _iSize,
+	                   const float32*& _pfValues, const unsigned int*& _piColIndices) const
+	{
+		assert(_iRow < m_iHeight);
+		unsigned long lStart = m_plRowStarts[_iRow];
+		_iSize = m_plRowStarts[_iRow+1] - lStart;
+		_pfValues = &m_pfValues[lStart];
+		_piColIndices = &m_piColIndices[lStart];
+	}
+
+	/** get the number of elements in a row
+	 *
+	 * @param _iRow the row
+	 * @return number of stored entries in the row
+	 */
+	unsigned int getRowSize(unsigned int _iRow) const
+	{
+		assert(_iRow < m_iHeight);
+		return m_plRowStarts[_iRow+1] - m_plRowStarts[_iRow];
+	}
+
+
+	/** Matrix width
+	 */
+	unsigned int m_iHeight;
+	
+	/** Matrix height
+	 */
+	unsigned int m_iWidth;
+	
+	/** Maximum number of non-zero entries
+	 */
+	unsigned long m_lSize;
+
+	/** Contains the numeric values of all non-zero elements
+	 */
+	float32* m_pfValues;
+	
+	/** Contains the colon index of all non-zero elements
+	 */
+	unsigned int* m_piColIndices;
+	
+	/** The indices in this array point to the first element of each row in the m_pfValues array
+	 */
+	unsigned long* m_plRowStarts;
+
+protected:
+	
+	/** Is the class initialized?
+	 */
+	bool m_bInitialized;
+};
+
+
+}
+
+
+#endif
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