/*
* Copyright (C) 2011-2013 Karlsruhe Institute of Technology
*
* This file is part of Ufo.
*
* This library is free software: you can redistribute it and/or
* modify it under the terms of the GNU Lesser General Public
* License as published by the Free Software Foundation, either
* version 3 of the License, or (at your option) any later version.
*
* This library is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with this library. If not, see .
*/
#ifdef __APPLE__
#include
#else
#include
#endif
#include
#include "ufo-roof-flat-field-correct-task.h"
struct _UfoRoofFlatFieldCorrectTaskPrivate {
gboolean fix_nan_and_inf;
gboolean absorptivity;
gboolean sinogram_input;
gfloat dark_scale;
gfloat flat_scale;
cl_kernel kernel;
};
static void ufo_task_interface_init (UfoTaskIface *iface);
G_DEFINE_TYPE_WITH_CODE (UfoRoofFlatFieldCorrectTask, ufo_roof_flat_field_correct_task, UFO_TYPE_TASK_NODE,
G_IMPLEMENT_INTERFACE (UFO_TYPE_TASK,
ufo_task_interface_init))
#define UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE(obj) (G_TYPE_INSTANCE_GET_PRIVATE((obj), UFO_TYPE_ROOF_FLAT_FIELD_CORRECT_TASK, UfoRoofFlatFieldCorrectTaskPrivate))
enum {
PROP_0,
PROP_FIX_NAN_AND_INF,
PROP_ABSORPTIVITY,
PROP_SINOGRAM_INPUT,
PROP_DARK_SCALE,
PROP_FLAT_SCALE,
N_PROPERTIES
};
static GParamSpec *properties[N_PROPERTIES] = { NULL, };
UfoNode *
ufo_roof_flat_field_correct_task_new (void)
{
return UFO_NODE (g_object_new (UFO_TYPE_ROOF_FLAT_FIELD_CORRECT_TASK, NULL));
}
static void
ufo_roof_flat_field_correct_task_setup (UfoTask *task,
UfoResources *resources,
GError **error)
{
UfoRoofFlatFieldCorrectTaskPrivate *priv;
priv = UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (task);
priv->kernel = ufo_resources_get_kernel (resources, "roof-ffc.cl", "flat_correct", NULL, error);
if (priv->kernel)
UFO_RESOURCES_CHECK_SET_AND_RETURN (clRetainKernel (priv->kernel), error);
}
static void
ufo_roof_flat_field_correct_task_get_requisition (UfoTask *task,
UfoBuffer **inputs,
UfoRequisition *requisition,
GError **error)
{
ufo_buffer_get_requisition (inputs[0], requisition);
if (ufo_buffer_cmp_dimensions (inputs[1], requisition) != 0 ||
ufo_buffer_cmp_dimensions (inputs[2], requisition) != 0) {
g_set_error_literal (error, UFO_TASK_ERROR, UFO_TASK_ERROR_GET_REQUISITION,
"flat-field-correct inputs must have the same size");
}
}
static guint
ufo_roof_flat_field_correct_task_get_num_inputs (UfoTask *task)
{
return 3;
}
static guint
ufo_roof_flat_field_correct_task_get_num_dimensions (UfoTask *task, guint input)
{
UfoRoofFlatFieldCorrectTaskPrivate *priv;
priv = UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (task);
g_return_val_if_fail (input <= 2, 0);
/* A sinogram */
if (input == 0)
return 2;
/* A row of dark frame depend on the sinogram_input flag */
return priv->sinogram_input ? 1 : 2;
}
static UfoTaskMode
ufo_roof_flat_field_correct_task_get_mode (UfoTask *task)
{
return UFO_TASK_MODE_PROCESSOR | UFO_TASK_MODE_GPU;
}
static gboolean
ufo_roof_flat_field_correct_task_process (UfoTask *task,
UfoBuffer **inputs,
UfoBuffer *output,
UfoRequisition *requisition)
{
UfoRoofFlatFieldCorrectTaskPrivate *priv;
UfoProfiler *profiler;
UfoGpuNode *node;
cl_command_queue cmd_queue;
cl_mem proj_mem;
cl_mem dark_mem;
cl_mem flat_mem;
cl_mem out_mem;
gint absorptivity, sino_in, fix_nan_and_inf;
node = UFO_GPU_NODE (ufo_task_node_get_proc_node (UFO_TASK_NODE (task)));
cmd_queue = ufo_gpu_node_get_cmd_queue (node);
proj_mem = ufo_buffer_get_device_array (inputs[0], cmd_queue);
dark_mem = ufo_buffer_get_device_array (inputs[1], cmd_queue);
flat_mem = ufo_buffer_get_device_array (inputs[2], cmd_queue);
out_mem = ufo_buffer_get_device_array (output, cmd_queue);
priv = UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (task);
absorptivity = (gint) priv->absorptivity;
sino_in = (gint) priv->sinogram_input;
fix_nan_and_inf = (gint) priv->fix_nan_and_inf;
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 0, sizeof (cl_mem), &out_mem));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 1, sizeof (cl_mem), &proj_mem));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 2, sizeof (cl_mem), &dark_mem));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 3, sizeof (cl_mem), &flat_mem));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 4, sizeof (cl_int), &sino_in));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 5, sizeof (cl_int), &absorptivity));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 6, sizeof (cl_int), &fix_nan_and_inf));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 7, sizeof (cl_float), &priv->dark_scale));
UFO_RESOURCES_CHECK_CLERR (clSetKernelArg (priv->kernel, 8, sizeof (cl_float), &priv->flat_scale));
profiler = ufo_task_node_get_profiler (UFO_TASK_NODE (task));
ufo_profiler_call (profiler, cmd_queue, priv->kernel, 2, requisition->dims, NULL);
return TRUE;
}
static void
ufo_roof_flat_field_correct_task_set_property (GObject *object,
guint property_id,
const GValue *value,
GParamSpec *pspec)
{
UfoRoofFlatFieldCorrectTaskPrivate *priv = UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (object);
switch (property_id) {
case PROP_FIX_NAN_AND_INF:
priv->fix_nan_and_inf = g_value_get_boolean (value);
break;
case PROP_ABSORPTIVITY:
priv->absorptivity = g_value_get_boolean (value);
break;
case PROP_SINOGRAM_INPUT:
priv->sinogram_input = g_value_get_boolean (value);
break;
case PROP_DARK_SCALE:
priv->dark_scale = g_value_get_float (value);
break;
case PROP_FLAT_SCALE:
priv->flat_scale = g_value_get_float (value);
break;
default:
G_OBJECT_WARN_INVALID_PROPERTY_ID (object, property_id, pspec);
break;
}
}
static void
ufo_roof_flat_field_correct_task_get_property (GObject *object,
guint property_id,
GValue *value,
GParamSpec *pspec)
{
UfoRoofFlatFieldCorrectTaskPrivate *priv = UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (object);
switch (property_id) {
case PROP_FIX_NAN_AND_INF:
g_value_set_boolean (value, priv->fix_nan_and_inf);
break;
case PROP_ABSORPTIVITY:
g_value_set_boolean (value, priv->absorptivity);
break;
case PROP_SINOGRAM_INPUT:
g_value_set_boolean (value, priv->sinogram_input);
break;
case PROP_DARK_SCALE:
g_value_set_float (value, priv->dark_scale);
break;
case PROP_FLAT_SCALE:
g_value_set_float (value, priv->flat_scale);
break;
default:
G_OBJECT_WARN_INVALID_PROPERTY_ID (object, property_id, pspec);
break;
}
}
static void
ufo_roof_flat_field_correct_task_finalize (GObject *object)
{
UfoRoofFlatFieldCorrectTaskPrivate *priv;
priv = UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE (object);
if (priv->kernel) {
UFO_RESOURCES_CHECK_CLERR (clReleaseKernel (priv->kernel));
priv->kernel = NULL;
}
G_OBJECT_CLASS (ufo_roof_flat_field_correct_task_parent_class)->finalize (object);
}
static void
ufo_task_interface_init (UfoTaskIface *iface)
{
iface->setup = ufo_roof_flat_field_correct_task_setup;
iface->get_num_inputs = ufo_roof_flat_field_correct_task_get_num_inputs;
iface->get_num_dimensions = ufo_roof_flat_field_correct_task_get_num_dimensions;
iface->get_mode = ufo_roof_flat_field_correct_task_get_mode;
iface->get_requisition = ufo_roof_flat_field_correct_task_get_requisition;
iface->process = ufo_roof_flat_field_correct_task_process;
}
static void
ufo_roof_flat_field_correct_task_class_init (UfoRoofFlatFieldCorrectTaskClass *klass)
{
GObjectClass *gobject_class = G_OBJECT_CLASS (klass);
gobject_class->set_property = ufo_roof_flat_field_correct_task_set_property;
gobject_class->get_property = ufo_roof_flat_field_correct_task_get_property;
gobject_class->finalize = ufo_roof_flat_field_correct_task_finalize;
properties[PROP_FIX_NAN_AND_INF] =
g_param_spec_boolean("fix-nan-and-inf",
"Replace NAN and INF values with 0.0",
"Replace NAN and INF values with 0.0",
FALSE,
G_PARAM_READWRITE);
/*
properties[PROP_ABSORPTIVITY] =
g_param_spec_boolean ("absorption-correct",
"Absorption correct",
"Absorption correct",
FALSE,
G_PARAM_READWRITE);
properties[PROP_SINOGRAM_INPUT] =
g_param_spec_boolean ("sinogram-input",
"If sinogram-input is True we correct only one line (the sinogram), thus darks are flats are 1D",
"If sinogram-input is True we correct only one line (the sinogram), thus darks are flats are 1D",
FALSE,
G_PARAM_READWRITE);
*/
properties[PROP_DARK_SCALE] =
g_param_spec_float ("dark-scale",
"Scale the dark field prior to the flat field correct",
"Scale the dark field prior to the flat field correct",
-G_MAXFLOAT, G_MAXFLOAT, 1.0f,
G_PARAM_READWRITE);
properties[PROP_FLAT_SCALE] =
g_param_spec_float ("flat-scale",
"Scale the flat field prior to the flat field correct",
"Scale the flat field prior to the flat field correct",
-G_MAXFLOAT, G_MAXFLOAT, 1.0f,
G_PARAM_READWRITE);
for (guint i = PROP_0 + 1; i < N_PROPERTIES; i++)
g_object_class_install_property (gobject_class, i, properties[i]);
g_type_class_add_private (gobject_class, sizeof(UfoRoofFlatFieldCorrectTaskPrivate));
}
static void
ufo_roof_flat_field_correct_task_init(UfoRoofFlatFieldCorrectTask *self)
{
self->priv = UFO_ROOF_FLAT_FIELD_CORRECT_TASK_GET_PRIVATE(self);
self->priv->fix_nan_and_inf = FALSE;
self->priv->absorptivity = FALSE;
self->priv->sinogram_input = FALSE;
self->priv->kernel = NULL;
self->priv->dark_scale = 1.0f;
self->priv->flat_scale = 1.0f;
}