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* Add utility functions for creating FP/BP JobListsWillem Jan Palenstijn2015-12-042-2/+113
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* Add CompositeGeometryManagerWillem Jan Palenstijn2015-12-0424-107/+2023
| | | | | This handles FP and BP operations on multiple data objects at once, splitting them to fit in GPU memory where necessary.
* Disable error-prone checksWillem Jan Palenstijn2015-12-041-0/+2
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* Detect ASTRA_CUDA in Windows CL flags for Python as wellWillem Jan Palenstijn2015-12-031-0/+6
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* Merge pull request #91 from wjp/volgeom3dWillem Jan Palenstijn2015-12-0230-1149/+600
|\ | | | | Remove restrictions on volgeom3d
| * Merge branch 'master' into volgeom3dWillem Jan Palenstijn2015-12-0241-350/+1728
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* | Fix Windows builds of astra_mex_directWillem Jan Palenstijn2015-12-023-0/+24
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* | Merge pull request #94 from wjp/cuda_options2Willem Jan Palenstijn2015-12-0133-347/+355
|\ \ | | | | | | Improve option passing via CudaProjector(2D/3D)
| * | Fix warning textWillem Jan Palenstijn2015-10-091-3/+3
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| * | Fix whitespaceWillem Jan Palenstijn2015-10-094-8/+8
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| * | Improve option passing through CudaProjector2DWillem Jan Palenstijn2015-10-0920-268/+169
| | | | | | | | | | | | | | | | | | | | | | | | Not all constructors were reading options from the projector. Also allow passing GPUIndex via CudaProjector2D. Also refactor CudaReconstructionAlgorithm::initialize/check to avoid code duplication with ReconstructionAlgorithm.
| * | Improve option passing through CudaProjector3DWillem Jan Palenstijn2015-10-0912-70/+172
| | | | | | | | | | | | | | | | | | | | | Not all constructors were reading options from the projector. Also allow passing GPUIndex via CudaProjector3D. Thanks to Nicola Vigano for part of the patch.
| * | Add options passing to projectors from matlabNicola Vigano2015-10-091-2/+7
| | | | | | | | | | | | Signed-off-by: Nicola Vigano <nicola.vigano@esrf.fr>
* | | Merge pull request #95 from wjp/mex_directWillem Jan Palenstijn2015-12-018-3/+1349
|\ \ \ | | | | | | | | astra_mex_direct
| * | | astra_mex_direct: Don't initialize newly allocated mxArrayNicola Vigano2015-10-091-2/+18
| | | | | | | | | | | | | | | | | | | | This avoids letting matlab initialize the memory we will overwrite shortly after.
| * | | Build astra_mex_direct in MSVCWillem Jan Palenstijn2015-10-075-2/+975
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| * | | Add astra_mex_direct('FP3D'/'BP3D', ...)Willem Jan Palenstijn2015-10-073-1/+358
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| | * Merge branch 'master' into volgeom3dWillem Jan Palenstijn2015-11-188-44/+85
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* | | Merge pull request #96 from wjp/cuda_constraint_warningWillem Jan Palenstijn2015-10-151-4/+12
|\ \ \ | | | | | | | | Give a warning on ignored Min/MaxContraint in some CUDA algorithms.
| * | | Give a warning on ignored Min/MaxContraint in some CUDA algorithms.Willem Jan Palenstijn2015-10-091-4/+12
| | | | | | | | | | | | | | | | Previously it would fail an assertion.
* | | | Merge pull request #97 from dmpelt/log_valist_fixWillem Jan Palenstijn2015-10-141-16/+44
|\ \ \ \ | |/ / / |/| | | Do not reuse va_list when logging both to screen and file
| * | | Do not reuse va_list when logging both to screen and fileDaniel M. Pelt2015-10-131-16/+44
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* | | | Call check() function after initializing CUDA_FBPWillem Jan Palenstijn2015-10-091-5/+3
| | | | | | | | | | | | | | | | This would cause crashes when specifying invalid data.
* | | | Fix loop bounds in (unused) Float32ProjectionData3D arithmetic functionsWillem Jan Palenstijn2015-10-091-16/+20
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* | | Use mxLogical instead of bool.Willem Jan Palenstijn2015-09-172-3/+3
| | | | | | | | | | | | This should improve compatibility with Octave according to Christian Häggström.
* | | Silence bogus warning:Christian Häggström2015-09-161-0/+1
| | | | | | | | | | | | Warning: CudaSirtAlgorithm3D: unused configuration options: SinogramMaskId
* | | Merge pull request #90 from wjp/opTomo_leakWillem Jan Palenstijn2015-09-091-0/+2
|\ \ \ | |/ / |/| | Fix algorithm leak in opTomo
| * | Fix algorithm leak in opTomoWillem Jan Palenstijn2015-09-041-0/+2
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| * Let astra_create_vol_geom also generate flexible volume geometriesWillem Jan Palenstijn2015-09-252-0/+30
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| * Merge branch 'master' into volgeom3dWillem Jan Palenstijn2015-09-16101-1304/+2196
| |\ | |/ |/| | | | | Conflicts: src/CudaBackProjectionAlgorithm3D.cpp
* | Fix algorithm object leak in astra_create_fbp_reconstruction.mWillem Jan Palenstijn2015-08-121-0/+1
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* | Merge pull request #88 from dmpelt/nogilWillem Jan Palenstijn2015-08-112-2/+4
|\ \ | | | | | | Release the gil in algorithm.run
| * | Release the gil in algorithm.runDaniel M. Pelt2015-08-102-2/+4
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* | Merge pull request #86 from dmpelt/scipy-0.16-optomo-fixWillem Jan Palenstijn2015-08-031-1/+17
|\ \ | | | | | | Small OpTomo fixes
| * | Define a transpose for the OpTomo transpose as wellDaniel M. Pelt2015-07-301-0/+8
| | | | | | | | | | | | Allows for chaining .T calls.
| * | Fix Python OpTomo for scipy 0.16Daniel M. Pelt2015-07-301-1/+9
|/ / | | | | | | | | | | scipy 0.16 also uses .T to define a transpose, which conflicts with the old OpTomo implementation. OpTomo now also defines the _transpose() method, which .T will call in scipy 0.16.
* | Merge pull request #84 from dmpelt/log-highlevel-fixWillem Jan Palenstijn2015-07-173-9/+9
|\ \ | | | | | | Fix formatting when passing strings to log from high-level code
| * | Fix formatting when passing strings to log from high-level codeDaniel M. Pelt2015-07-173-9/+9
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* | Merge pull request #75 from wjp/cuda_optionsWillem Jan Palenstijn2015-06-2614-73/+197
|\ \ | | | | | | Move supersampling options from Algorithm to CudaProjector
| * | Update sampleWillem Jan Palenstijn2015-06-231-18/+10
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| * | Use supersampling options from CudaProjector2DWillem Jan Palenstijn2015-06-233-36/+73
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| * | Use supersampling options from CudaProjector3DWillem Jan Palenstijn2015-06-046-18/+88
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| * | Add supersampling options to Cuda ProjectorsWillem Jan Palenstijn2015-05-224-1/+26
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* | | Merge pull request #76 from dmpelt/projector-configuration-fixWillem Jan Palenstijn2015-06-267-11/+42
|\ \ \ | | | | | | | | Configuration fixes
| * | | Fix memory leak in configuration codeDaniel M. Pelt2015-06-254-9/+28
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| * | | Add extra null check for ExtraDetectorOffsetDaniel M. Pelt2015-06-251-3/+5
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| * | | Include ExtraDetectorOffset in returned configurationDaniel M. Pelt2015-06-241-0/+3
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| * | | Fix config to struct/dict translation for array optionsDaniel M. Pelt2015-06-242-2/+9
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* | | Add some common temporary file patterns to .gitignore.Willem Jan Palenstijn2015-06-231-22/+30
| | | | | | | | | | | | Also add leading slashes to full paths for consistency.
* | | Merge pull request #74 from dmpelt/small-fixesWillem Jan Palenstijn2015-06-234-5/+28
|\ \ \ | | | | | | | | Small fixes
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