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| author | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2015-09-16 12:01:02 +0200 |
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| committer | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2015-09-16 12:01:02 +0200 |
| commit | 55cbaa5df6f91594b7cd69754e04c186c7c88c97 (patch) | |
| tree | b1456253660a7762df6868d1452a6d9480e25b19 /README.md | |
| parent | 7584ffbd6748bcca8c3f7ed2dc961be01f2fcfdc (diff) | |
| parent | 026aa46c5db24ddd687cec0fa6e056a2ee3790c5 (diff) | |
| download | astra-55cbaa5df6f91594b7cd69754e04c186c7c88c97.tar.gz astra-55cbaa5df6f91594b7cd69754e04c186c7c88c97.tar.bz2 astra-55cbaa5df6f91594b7cd69754e04c186c7c88c97.tar.xz astra-55cbaa5df6f91594b7cd69754e04c186c7c88c97.zip | |
Merge branch 'master' into volgeom3d
Conflicts:
src/CudaBackProjectionAlgorithm3D.cpp
Diffstat (limited to 'README.md')
| -rw-r--r-- | README.md | 16 |
1 files changed, 12 insertions, 4 deletions
@@ -23,12 +23,14 @@ Add the mex and tools subdirectories to your matlab path. ### Linux, from source -Requirements: g++, boost, CUDA (driver+toolkit), matlab +Requirements: g++, boost, CUDA (driver+toolkit), Matlab and/or Python (2.7 or 3.x) ``` cd build/linux +./autogen.sh # when building a git version ./configure --with-cuda=/usr/local/cuda \ --with-matlab=/usr/local/MATLAB/R2012a \ + --with-python --prefix=/usr/local/astra make make install @@ -36,6 +38,7 @@ make install Add /usr/local/astra/lib to your LD_LIBRARY_PATH. Add /usr/local/astra/matlab and its subdirectories (tools, mex) to your matlab path. +Add /usr/local/astra/python to your PYTHONPATH. NB: Each matlab version only supports a specific range of g++ versions. @@ -64,9 +67,14 @@ Install by copying AstraCuda32.dll or AstraCuda64.dll from bin/ and ## References -If you use parallel beam GPU code for your research, we would appreciate it if you would refer to the following paper: +If you use the ASTRA Toolbox for your research, we would appreciate it if you would refer to the following paper: + +W. van Aarle, W. J. Palenstijn, J. De Beenhouwer, T. Altantzis, S. Bals, K J. Batenburg, and J. Sijbers, "The ASTRA Toolbox: A platform for advanced algorithm development in electron tomography", Ultramicroscopy (2015), http://dx.doi.org/10.1016/j.ultramic.2015.05.002 + +Additionally, if you use parallel beam GPU code, we would appreciate it if you would refer to the following paper: + +W. J. Palenstijn, K J. Batenburg, and J. Sijbers, "Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs)", Journal of Structural Biology, vol. 176, issue 2, pp. 250-253, 2011, http://dx.doi.org/10.1016/j.jsb.2011.07.017 -W. J. Palenstijn, K J. Batenburg, and J. Sijbers, "Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs)", Journal of Structural Biology, vol. 176, issue 2, pp. 250-253, 2011. ## License @@ -79,4 +87,4 @@ website: http://sf.net/projects/astra-toolbox Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp 2014-2015, CWI, Amsterdam - http://visielab.uantwerpen.be/ and http://www.cwi.nl/
\ No newline at end of file + http://visielab.uantwerpen.be/ and http://www.cwi.nl/ |