REM No grep in batch, but Powershell supports it. We can convert script to powershell
REM path=$(cat ../.env | grep -oP 'BIOMEDISA_HOST_SRC_PATH=\K.*')

SET BIOMEDISA_PATH=C:/Users/csa/biomedisa/
SET PYTHON_PATH="C:\Users\csa\AppData\Roaming\Python\Scripts"

SET PATH=%PATH%;%PYTHON_PATH%;
SET PYTHONPATH=%BIOMEDISA_PATH%;%PYTHONPATH%
SET DJANGO_SETTINGS_MODULE=biomedisa.settings
SET BIOMEDISA_SRC_PATH="%BIOMEDISA_PATH%"
SET MYSQL_HOST=127.0.0.1
SET REDIS_HOST="localhost"

REM RQ is not working on Windows due to absent (clone). RQ-win project doesn't work with current version of RQ (but probably easy to fix)
REM cd "%BIOMEDISA_PATH%" || exit -1
REM %PYTHON_PATH%\rqworker -w rq_win.WindowsWorker -u http://localhost first_queue

REM This fails since different paths are written to MySQL database from the containers....
REM cd biomedisa_features/random_walk
REM python rw_main.py  C:\Users\csa\biomedisa\media\images\tumor.tif C:\Users\csa\biomedisa\media\images\labels.tumor.tif